Production of enzymes by biotechnological methods: A review
Abstract
enzymes are essential biological catalysts widely utilized in diverse industries such as pharmaceuticals, food processing, biofuels, and environmental technology due to their high specificity, efficiency, and eco-friendliness. With increasing global demand, conventional methods of enzyme extraction have become inadequate, leading to the development of advanced biotechnological approaches. The aim of this review is to analyze contemporary strategies for enzyme production using biotechnological methods, evaluate their benefits and limitations, and explore emerging trends aimed at improving enzyme yield, stability, and industrial applicability. The materials and methods used in this review involved a comprehensive analysis of scientific publications over the past three years obtained from international databases, using keywords such as enzyme production, fermentation, recombinant DNA, and protein engineering. The data were synthesized through critical review of original research, review articles, and industrial reports. Biotechnological enzyme production predominantly relies on microbial systems due to their rapid growth, adaptability, and cost-effective fermentation capabilities. Bacteria, fungi, and yeasts are employed in submerged or solid-state fermentation, offering scalability and precise process control. Genetically engineered microorganisms, particularly Escherichia coli, Saccharomyces cerevisiae, and Pichia pastoris, are frequently used as expression hosts, enabling high-yield production and post-translational modifications. The review highlights the significance of recombinant DNA technology, emphasizing cloning strategies, vector design, expression optimization, and fusion proteins for improved purification and secretion. Protein engineering techniques such as rational design and directed evolution allow the fine-tuning of enzyme properties, enhancing thermal stability, pH tolerance, and substrate specificity. These advances have had transformative effects on the pharmaceutical sector, enabling efficient drug synthesis and delivery systems, and supporting sustainable production practices across industries. Although plant- and animal-derived enzymes retain specific industrial roles, microbial enzymes remain dominant due to their robustness and efficiency. Fermentation techniques are central to enzyme production, with submerged fermentation favored for its automation potential, and solid-state fermentation offering higher concentrations and lower costs. The integration of synthetic biology, metagenomics, and AI-driven process control is expected to redefine future enzyme production. In conclusion, biotechnological methods have significantly enhanced the feasibility, scalability, and sustainability of industrial enzyme production. Continued innovation in genetic and protein engineering, coupled with process optimization, promises to expand enzyme applications across emerging industrial sectors.References
Martin B**, Smith A.** Recent progress in key lignocellulosic enzymes: Enzyme discovery, molecular modifications, production, and enzymatic biomass saccharification. Bioresour Technol. 2022;363:127986. doi:10.1016/j.biortech.2022.127986.
Mao S**, Jiang J**, Xiong K**, Chen Y*, Yao Y, Liu L, Liu H, Li X.** Enzyme Engineering: Performance Optimization, Novel Sources, and Applications in the Food Industry. Foods. 2024;13(23):3846. doi:10.3390/foods13233846.
Dai Y**, Chen Y**, Lin X**, Zhang S.** Recent Applications and Prospects of Enzymes in Quality and Safety Control of Fermented Foods. Foods. 2024;13(23):3804. doi:10.3390/foods13233804.
Zimo J.** Advances in Microbial Enzyme Engineering for Biotechnological Applications. J Microb Biochem Technol. 2023;15:559. doi:10.35248/1948 5948.23.15.559.
Korsa G, Konwarh R, Masi C, Abate A, Setegn H. Microbial cellulase production and its potential application for textile industries. Ann Microbiol. 2023;73(4):13–22.
Kiribayeva A, Mukanov B, Silayev D, Akishev Z, Ramankulov Y, Khassenov B. Cloning, expression, and characterization of a recombinant xylanase from Bacillus sonorensis T6. PLoS ONE. 2022;17(3): e0265647.
Cowan DA, Tombs MP. Industrial enzymes. Biotechnol Sci Bus. 2022;67(4):319–50.
Yan X, Liu X, Zhao C, Chen GQ. Applications of synthetic biology in medical and pharmaceutical fields. Signal transduction and targeted therapy. 2023 May 11;8(1):199.
Patel NY, Baria DM, Pardhi DS, Yagnik SM, Panchal RR, Rajput KN, Raval VH. Microbial enzymes in pharmaceutical industry. In Biotechnology of microbial enzymes 2023 Jan 1 (pp. 375-403). Academic Press.
Zubair M, Sultan HM, Ghazanfar S, Khalid S, Rehman MZ, Islam A, Ashique S. Advances in the Production of Recombinant Protease through Expression Systems: An Updated Review. Current Enzyme Inhibition. 2025.
Upadhyaya C, Patel H, Patel I, Upadhyaya T. Extremophilic Exopolysaccharides: Bioprocess and Novel Applications in 21st Century. Fermentation. 2025 Jan 2;11(1):16.
Özışık B. Bacterial Polygalacturonase Production Using Apple Pomace by Submerged Fermentation (Master's thesis, Middle East Technical University (Turkey)).
Amin AA, Olama ZA, Ali SM. Characterization of an isolated lactase enzyme produced by Bacillus licheniformis ALSZ2 as a potential pharmaceutical supplement for lactose intolerance. Frontiers in Microbiology. 2023 Sep 13;14:1180463.
Zambrano KH, Villafuerte CD, Delgado ER. Effect of Solid-state Fermentation Parameters on Growth of Interest and Environmental Enzyme Production with Aspergillus niger. Orbital: The Electronic Journal of Chemistry. 2023 Oct 13:176-83.
Patel C**, Kumar D.** Bioprospecting of microbial enzymes: current trends in industry and healthcare. Springer Rev. 2022; Author(s), under exclusive licence to Springer Verlag GmbH Germany, part of Springer Nature.
Atiku YM, Abdulsalam S, Mohammed J, Ahmed SI. Conversion of Cellulosic Biomass to Bioethanol through Fermentation Using Native Microorganisms: A Review. Journal of Applied Sciences and Environmental Management. 2023 Sep 3;27(8):1651-64.
Zuhri AR, Wilda S. An Overview of Lactase Enzyme: Microbial Sources, Substrate Range, Fermentation Approaches, Extraction Techniques, and Industrial Applications. Journal of Integrative Natural Science. 2024 Nov 15;1(1):1-9.
Ganjoo A, Babu V. Recombinant amidases: recent insights and its applications in the production of industrially important fine chemicals. Molecular Biotechnology. 2025 Mar;67(3):910-24.
Yavari-Bafghi M, Amoozegar MA. Pharmaceutical applications of halophilic enzymes. Heliyon. 2025 Feb 28;11(4).
Deng W, Zhao Z, Zou T, Kuang T, Wang J. Research advances in fusion protein-based drugs for diabetes treatment. Diabetes, Metabolic Syndrome and Obesity. 2024 Dec 31:343-62.
Ehsasatvatan M, Baghban Kohnehrouz B. A new trivalent recombinant protein for type 2 diabetes mellitus with oral delivery potential: design, expression, and experimental validation. Journal of Biomolecular Structure and Dynamics. 2024 Mar 9:1-6.
Tsybruk TV, Kaluzhskiy LA, Mezentsev YV, Makarieva TN, Tabakmaher KM, Ivanchina NV, Dmitrenok PS, Baranovsky AV, Gilep AA, Ivanov AS. Molecular Cloning, Heterologous Expression, Purification, and Evaluation of Protein–Ligand Interactions of CYP51 of Candida krusei Azole-Resistant Fungal Strain. Biomedicines. 2023 Oct 24;11(11):2873.
Jayakrishnan A, Wan Rosli WR, Tahir AR, Razak FS, Kee PE, Ng HS, Chew YL, Lee SK, Ramasamy M, Tan CS, Liew KB. Evolving paradigms of recombinant protein production in pharmaceutical industry: a rigorous review. Sci. 2024 Jan 31;6(1):9.
Sodoyer R. Expression systems for the production of recombinant pharmaceuticals. BioDrugs. 2004 Jan;18(1):51-62.

This work is licensed under a Creative Commons Attribution 4.0 International License.
ISSN
ISSN 














